BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A08SP1|AL426628
(719 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1381 0.0
>3x_Contig1593
Length = 10902
Score = 1381 bits (695), Expect = 0.0
Identities = 712/717 (99%), Gaps = 2/717 (0%)
Strand = Plus / Plus
Query: 1 tatatcctgcaacgc-gtgcttagggtttgccattacgaattaacgaatgctttgaatgc 59
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4325 tatatcctgcaacgcagtgct-agggtttgccattacgaattaacgaatgctttgaatgc 4383
Query: 60 tgtttcggagataaaatcctgctatagacacaacagagcggcaatgcaaccaggtctgcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 tgtttcggagataaaatcctgctatagacacaacagagcggcaatgcaaccaggtctgcc 4443
Query: 120 aaggtgttaaaaaagattgatcaaaagagacacacgattatttcgaaatcctttccagta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 aaggtgttaaaaaagattgatcaaaagagacacacgattatttcgaaatcctttccagta 4503
Query: 180 tattcaacaggttcaacacaagcacagacacgagagatgttttaatccacccactaccgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 tattcaacaggttcaacacaagcacagacacgagagatgttttaatccacccactaccgg 4563
Query: 240 cctatatgtatcaataacagctcaccctatcctgacttcaagacactattgattatgaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 cctatatgtatcaataacagctcaccctatcctgacttcaagacactattgattatgaaa 4623
Query: 300 actcgattgattgtaatttctgtttttttaacatgaaagaacgttgaaaaaaaaactgag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4624 actcgattgattgtaatttctgtttttttaacatgaaagaacgttgaaaaaaaaactgag 4683
Query: 360 cttcgatatagtatgcgtataggagtaaaggtgtgaagagtgaagatggaagaaggatgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 cttcgatatagtatgcgtataggagtaaaggtgtgaagagtgaagatggaagaaggatgg 4743
Query: 420 tccatgaccaacttgatagttcctgcggagttcgtcgttgtcaaatgacacatatgtgag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4744 tccatgaccaacttgatagttcctgcggagttcgtcgttgtcaaatgacacatatgtgag 4803
Query: 480 aaagtgtagtgtaacttcttgtatgaagacttgcaagtatatatkavrtgatatatatat 539
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 4804 aaagtgtagtgtaacttcttgtatgaagacttgcaagtatatattaaatgatatatatat 4863
Query: 540 gggaagactgccgtaaaatatgttacataggacgagttatgttataacctgaaggacacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 gggaagactgccgtaaaatatgttacataggacgagttatgttataacctgaaggacacc 4923
Query: 600 gaggcacactaggtgtgactgtgcttgcctagtcctgttgttcctgttgcttcttcttat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4924 gaggcacactaggtgtgactgtgcttgcctagtcctgttgttcctgttgcttcttcttat 4983
Query: 660 cgagatcttgctgcttttcggcttcgatttcatcgacatagttgcttatctcttcgg 716
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 cgagatcttgctgcttttcggcttcgatttcatcgacatagttgcttatctcttcgg 5040
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5503
Number of Sequences: 1807
Number of extensions: 5503
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 719
length of database: 10,358,551
effective HSP length: 16
effective length of query: 703
effective length of database: 10,329,639
effective search space: 7261736217
effective search space used: 7261736217
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)